Congrats to all who have made submissions. We are almost at the end!
\nHere’s a timeline of remaining events in the competition:
\nGood luck to all!
", "messages": [ { "id": 3427833, "postDate": "2026-03-24T15:53:38.803Z", "content": "Congrats to all who have made submissions. We are almost at the end!
\nHere’s a timeline of remaining events in the competition:
\nGood luck to all!
", "rawMarkdown": "Congrats to all who have made submissions. We are almost at the end! \n\n Here’s a timeline of remaining events in the competition:\n\n- If you’re updating your database of 3D structures, note that the last [PDB](https://www.rcsb.org/) release before competition end is in <12 hours, at 00:00:00 UTC on Wed., March 25, 2026.\n- **The submission deadline is on 11:59:00 PM UTC on Wed., March 25, 2026**. To be considered for the competition, your notebooks have to finish running by that time!\n- The competition will then be frozen. Two notebooks from each team will be re-run on the final hidden test set. If you do not select your two notebooks, the ones with best score on Public leaderboard will be automatically selected for this rerun.\n- We are hoping to post final results on the [Private Leaderboard](https://www.kaggle.com/competitions/stanford-rna-3d-folding-2/leaderboard?tab=private) by the end of next week, April 4, 2026.\n- We anticipate that some notebooks may be competitive with the top expert RNA groups in the world. If you’d like to find out, you may be interested in setting up your notebooks to enter the 17th Critical Assessment for Structure Prediction, running from April to August 2026. As a heads up, the dry run for servers begins on April 13, 2026. More info is available on the [CASP17 page](https://predictioncenter.org/casp17/index.cgi).\n\nGood luck to all!", "votes": 6 }, { "id": 3429652, "postDate": "2026-03-27T03:25:53.447Z", "content": "Hi, I was ranked 22nd on the public LB, but why I was removed from LB today? I can no longer find myself on the LB and my profile doesn't show that I participated? @rhijudas @ashleyoldacre @inversion
", "rawMarkdown": "Hi, I was ranked 22nd on the public LB, but why I was removed from LB today? I can no longer find myself on the LB and my profile doesn't show that I participated? @rhijudas @ashleyoldacre @inversion ", "votes": 2, "replies": [ { "id": 3429654, "postDate": "2026-03-27T03:32:35.327Z", "content": "I compete solo and am pretty sure not violating any rule. I have only one account and have never shared my code with anyone else! Is there a reason behind this removal? If it is done by mistake, is there a way to appeal?
", "rawMarkdown": "I compete solo and am pretty sure not violating any rule. I have only one account and have never shared my code with anyone else! Is there a reason behind this removal? If it is done by mistake, is there a way to appeal?" }, { "id": 3429664, "postDate": "2026-03-27T03:52:08Z", "content": "I have submitted a detailed compliance form via kaggle, please investigate! This is very demoralizing and frustrating!!!
", "rawMarkdown": "I have submitted a detailed compliance form via kaggle, please investigate! This is very demoralizing and frustrating!!!" } ] }, { "id": 3428786, "postDate": "2026-03-25T23:13:02.053Z", "content": "hi there can we extend the end by 1 days 🙋- 12 hours even / i have used my quote of gpu trying to adapt both protenix and ribonanzanet2 with the tbm - i even buy more quote through google colab and they suppose to add 30 hours / they gave me 15 only without any specific reason / i think this way i can achive even 0.65 as a score and win 😅 and as a clarification - how do i select the 2 notebooks
", "rawMarkdown": "hi there can we extend the end by 1 days 🙋- 12 hours even / i have used my quote of gpu trying to adapt both protenix and ribonanzanet2 with the tbm - i even buy more quote through google colab and they suppose to add 30 hours / they gave me 15 only without any specific reason / i think this way i can achive even 0.65 as a score and win 😅 and as a clarification - how do i select the 2 notebooks", "votes": -1, "replies": [ { "id": 3429867, "postDate": "2026-03-27T13:18:40.250Z", "content": "wow！0.65 is very high 😆
", "rawMarkdown": "wow！0.65 is very high 😆", "replies": [ { "id": 3434785, "postDate": "2026-04-03T08:21:06.977Z", "content": "i think its achivable, do you know what is public and private scores? does that mean for data so for the public data that is the score 0.58 , and private/hidden data they test with score is 0.42
", "rawMarkdown": "i think its achivable, do you know what is public and private scores? does that mean for data so for the public data that is the score 0.58 , and private/hidden data they test with score is 0.42" } ] } ] }, { "id": 3428895, "postDate": "2026-03-26T03:30:05.063Z", "content": "Hello organizers,
\nI am writing regarding my final submission selection for the Stanford RNA 3D Folding Part 2 competition.
\nI accidentally selected the wrong notebook as my final submission before the deadline.
\nThe notebook currently selected is:\n“stanford-rna-3d-folding-top1-rankv2”
\nScript Version ID: 305282320
The notebook I intended to select is:\n“stanford-rna-3d-folding-top2-repro”
\nScript Version ID: 305272028
Both notebooks were completed successfully and scored before the competition deadline. The intended notebook is my highest-scoring valid submission on the public leaderboard, and I would like to ask whether it is still possible to update my final selected submission before the private leaderboard is finalized.
\nFor reference:\nCurrent selection: https://www.kaggle.com/code/hlf111/stanford-rna-3d-folding-top1-rankv2?scriptVersionId=305282320
\nIntended selection: https://www.kaggle.com/code/hlf111/stanford-rna-3d-folding-top2-repro?scriptVersionId=305272028
I understand if changes are not possible after the deadline, but I wanted to check in case there is any way to correct an accidental selection.
\nThank you very much for your time and help.
\nBest regards,
\nhlf111
Look at it this way, if this is allowed, you don't think people will abuse it?
", "rawMarkdown": "Look at it this way, if this is allowed, you don't think people will abuse it?\n" } ] }, { "id": 3429630, "postDate": "2026-03-27T02:20:16.603Z", "content": "@rhijudas, I saw on CASP17 that registration starts on 30th of March. My question is can I still register for it? If so when does the registration close for this?
", "rawMarkdown": "@rhijudas, I saw on [CASP17](https://predictioncenter.org/casp17/index.cgi) that registration starts on 30th of March. My question is can I still register for it? If so when does the registration close for this?", "replies": [ { "id": 3429633, "postDate": "2026-03-27T02:36:22.710Z", "content": "Great question. I'd recommend registering by April 13, 2026, so you can set up a server to make predictions for the 'dry run' that begins then. if you have more specific questions, please post here and I'll loop in the CASP organizers to answer ASAP.
", "rawMarkdown": "Great question. I'd recommend registering by April 13, 2026, so you can set up a server to make predictions for the 'dry run' that begins then. if you have more specific questions, please post here and I'll loop in the CASP organizers to answer ASAP.", "votes": 1 } ] }, { "id": 3428948, "postDate": "2026-03-26T05:44:31.043Z", "content": "Thanks for hosting the competition! I'm very very new to the field and had a lot of fun learning and improving my solution over the months. This competition has got me interested enough to do further research and keep working on it in my free time even after the competition has ended.
", "rawMarkdown": "Thanks for hosting the competition! I'm very very new to the field and had a lot of fun learning and improving my solution over the months. This competition has got me interested enough to do further research and keep working on it in my free time even after the competition has ended. " }, { "id": 3428064, "postDate": "2026-03-24T22:18:57.887Z", "content": "The submission deadline is on 11:59:00 PM UTC on Wed., March 25, 2026. To be considered for the competition, your notebooks have to finish running by that time!\nfinish running in the submition more or just the save and commit ! , thanks .
", "rawMarkdown": "The submission deadline is on 11:59:00 PM UTC on Wed., March 25, 2026. To be considered for the competition, your notebooks have to finish running by that time!\nfinish running in the submition more or just the save and commit ! , thanks .", "replies": [ { "id": 3428131, "postDate": "2026-03-25T02:04:09.050Z", "content": "Your notebooks must complete scoring by the deadline. They cannot just be saved/committed.
", "rawMarkdown": "Your notebooks must *complete* scoring by the deadline. They cannot just be saved/committed.", "votes": 1 } ] }, { "id": 3428047, "postDate": "2026-03-24T21:12:47.797Z", "content": "Participants may also be excited to know that OpenFold 3 has very recently released their RNA-only distillation datasets (these are predicted 3D structures for a large number of RNA sequences from the RFAM database): https://x.com/MoAlQuraishi/status/2032471033760903511
\nThese could further boost template-based modelling and deep learning-driven approaches!
", "rawMarkdown": "Participants may also be excited to know that OpenFold 3 has very recently released their RNA-only distillation datasets (these are predicted 3D structures for a large number of RNA sequences from the RFAM database): https://x.com/MoAlQuraishi/status/2032471033760903511\n\nThese could further boost template-based modelling and deep learning-driven approaches!" } ], "comments": [ { "id": 3429652, "author_name": "hongan", "author_url": "", "post_date": "2026-03-27T03:25:53.447000", "content": "Hi, I was ranked 22nd on the public LB, but why I was removed from LB today? I can no longer find myself on the LB and my profile doesn't show that I participated? @rhijudas @ashleyoldacre @inversion
", "votes": 2, "replies": [ { "id": 3429654, "author_name": "hongan", "author_url": "", "post_date": "2026-03-27T03:32:35.327000", "content": "I compete solo and am pretty sure not violating any rule. I have only one account and have never shared my code with anyone else! Is there a reason behind this removal? If it is done by mistake, is there a way to appeal?
", "votes": 0, "replies": [] }, { "id": 3429664, "author_name": "hongan", "author_url": "", "post_date": "2026-03-27T03:52:08", "content": "I have submitted a detailed compliance form via kaggle, please investigate! This is very demoralizing and frustrating!!!
", "votes": 0, "replies": [] } ] }, { "id": 3428786, "author_name": "AhmedMHussien", "author_url": "", "post_date": "2026-03-25T23:13:02.053000", "content": "hi there can we extend the end by 1 days 🙋- 12 hours even / i have used my quote of gpu trying to adapt both protenix and ribonanzanet2 with the tbm - i even buy more quote through google colab and they suppose to add 30 hours / they gave me 15 only without any specific reason / i think this way i can achive even 0.65 as a score and win 😅 and as a clarification - how do i select the 2 notebooks
", "votes": -1, "replies": [ { "id": 3429867, "author_name": "Zejun_", "author_url": "", "post_date": "2026-03-27T13:18:40.250000", "content": "wow！0.65 is very high 😆
", "votes": 0, "replies": [ { "id": 3434785, "author_name": "AhmedMHussien", "author_url": "", "post_date": "2026-04-03T08:21:06.977000", "content": "i think its achivable, do you know what is public and private scores? does that mean for data so for the public data that is the score 0.58 , and private/hidden data they test with score is 0.42
", "votes": 0, "replies": [] } ] } ] }, { "id": 3428895, "author_name": "hlf111", "author_url": "", "post_date": "2026-03-26T03:30:05.063000", "content": "Hello organizers,
\nI am writing regarding my final submission selection for the Stanford RNA 3D Folding Part 2 competition.
\nI accidentally selected the wrong notebook as my final submission before the deadline.
\nThe notebook currently selected is:\n“stanford-rna-3d-folding-top1-rankv2”
\nScript Version ID: 305282320
The notebook I intended to select is:\n“stanford-rna-3d-folding-top2-repro”
\nScript Version ID: 305272028
Both notebooks were completed successfully and scored before the competition deadline. The intended notebook is my highest-scoring valid submission on the public leaderboard, and I would like to ask whether it is still possible to update my final selected submission before the private leaderboard is finalized.
\nFor reference:\nCurrent selection: https://www.kaggle.com/code/hlf111/stanford-rna-3d-folding-top1-rankv2?scriptVersionId=305282320
\nIntended selection: https://www.kaggle.com/code/hlf111/stanford-rna-3d-folding-top2-repro?scriptVersionId=305272028
I understand if changes are not possible after the deadline, but I wanted to check in case there is any way to correct an accidental selection.
\nThank you very much for your time and help.
\nBest regards,
\nhlf111
Look at it this way, if this is allowed, you don't think people will abuse it?
", "votes": 0, "replies": [] } ] }, { "id": 3429630, "author_name": "YaGana Sheriff-Hussaini", "author_url": "", "post_date": "2026-03-27T02:20:16.603000", "content": "@rhijudas, I saw on CASP17 that registration starts on 30th of March. My question is can I still register for it? If so when does the registration close for this?
", "votes": 0, "replies": [ { "id": 3429633, "author_name": "Rhiju Das", "author_url": "", "post_date": "2026-03-27T02:36:22.710000", "content": "Great question. I'd recommend registering by April 13, 2026, so you can set up a server to make predictions for the 'dry run' that begins then. if you have more specific questions, please post here and I'll loop in the CASP organizers to answer ASAP.
", "votes": 1, "replies": [] } ] }, { "id": 3428948, "author_name": "Rishikesh Jani", "author_url": "", "post_date": "2026-03-26T05:44:31.043000", "content": "Thanks for hosting the competition! I'm very very new to the field and had a lot of fun learning and improving my solution over the months. This competition has got me interested enough to do further research and keep working on it in my free time even after the competition has ended.
", "votes": 0, "replies": [] }, { "id": 3428064, "author_name": "abdou fedjkhi", "author_url": "", "post_date": "2026-03-24T22:18:57.887000", "content": "The submission deadline is on 11:59:00 PM UTC on Wed., March 25, 2026. To be considered for the competition, your notebooks have to finish running by that time!\nfinish running in the submition more or just the save and commit ! , thanks .
", "votes": 0, "replies": [ { "id": 3428131, "author_name": "Rhiju Das", "author_url": "", "post_date": "2026-03-25T02:04:09.050000", "content": "Your notebooks must complete scoring by the deadline. They cannot just be saved/committed.
", "votes": 1, "replies": [] } ] }, { "id": 3428047, "author_name": "Chaitanya Joshi", "author_url": "", "post_date": "2026-03-24T21:12:47.797000", "content": "Participants may also be excited to know that OpenFold 3 has very recently released their RNA-only distillation datasets (these are predicted 3D structures for a large number of RNA sequences from the RFAM database): https://x.com/MoAlQuraishi/status/2032471033760903511
\nThese could further boost template-based modelling and deep learning-driven approaches!
", "votes": 0, "replies": [] } ], "raw_markdown_by_id": { "3427833": "Congrats to all who have made submissions. We are almost at the end! \n\n Here’s a timeline of remaining events in the competition:\n\n- If you’re updating your database of 3D structures, note that the last [PDB](https://www.rcsb.org/) release before competition end is in <12 hours, at 00:00:00 UTC on Wed., March 25, 2026.\n- **The submission deadline is on 11:59:00 PM UTC on Wed., March 25, 2026**. To be considered for the competition, your notebooks have to finish running by that time!\n- The competition will then be frozen. Two notebooks from each team will be re-run on the final hidden test set. If you do not select your two notebooks, the ones with best score on Public leaderboard will be automatically selected for this rerun.\n- We are hoping to post final results on the [Private Leaderboard](https://www.kaggle.com/competitions/stanford-rna-3d-folding-2/leaderboard?tab=private) by the end of next week, April 4, 2026.\n- We anticipate that some notebooks may be competitive with the top expert RNA groups in the world. If you’d like to find out, you may be interested in setting up your notebooks to enter the 17th Critical Assessment for Structure Prediction, running from April to August 2026. As a heads up, the dry run for servers begins on April 13, 2026. More info is available on the [CASP17 page](https://predictioncenter.org/casp17/index.cgi).\n\nGood luck to all!", "3429652": "Hi, I was ranked 22nd on the public LB, but why I was removed from LB today? I can no longer find myself on the LB and my profile doesn't show that I participated? @rhijudas @ashleyoldacre @inversion ", "3428786": "hi there can we extend the end by 1 days 🙋- 12 hours even / i have used my quote of gpu trying to adapt both protenix and ribonanzanet2 with the tbm - i even buy more quote through google colab and they suppose to add 30 hours / they gave me 15 only without any specific reason / i think this way i can achive even 0.65 as a score and win 😅 and as a clarification - how do i select the 2 notebooks", "3428895": "Hello organizers,\n\nI am writing regarding my final submission selection for the Stanford RNA 3D Folding Part 2 competition.\n\nI accidentally selected the wrong notebook as my final submission before the deadline.\n\nThe notebook currently selected is:\n“stanford-rna-3d-folding-top1-rankv2” \nScript Version ID: `305282320`\n\nThe notebook I intended to select is:\n“stanford-rna-3d-folding-top2-repro” \nScript Version ID: `305272028`\n\nBoth notebooks were completed successfully and scored before the competition deadline. The intended notebook is my highest-scoring valid submission on the public leaderboard, and I would like to ask whether it is still possible to update my final selected submission before the private leaderboard is finalized.\n\nFor reference:\nCurrent selection: https://www.kaggle.com/code/hlf111/stanford-rna-3d-folding-top1-rankv2?scriptVersionId=305282320 \nIntended selection: https://www.kaggle.com/code/hlf111/stanford-rna-3d-folding-top2-repro?scriptVersionId=305272028\n\nI understand if changes are not possible after the deadline, but I wanted to check in case there is any way to correct an accidental selection.\n\nThank you very much for your time and help.\n\nBest regards, \nhlf111", "3429630": "@rhijudas, I saw on [CASP17](https://predictioncenter.org/casp17/index.cgi) that registration starts on 30th of March. My question is can I still register for it? If so when does the registration close for this?", "3428948": "Thanks for hosting the competition! I'm very very new to the field and had a lot of fun learning and improving my solution over the months. This competition has got me interested enough to do further research and keep working on it in my free time even after the competition has ended. ", "3428064": "The submission deadline is on 11:59:00 PM UTC on Wed., March 25, 2026. To be considered for the competition, your notebooks have to finish running by that time!\nfinish running in the submition more or just the save and commit ! , thanks .", "3428047": "Participants may also be excited to know that OpenFold 3 has very recently released their RNA-only distillation datasets (these are predicted 3D structures for a large number of RNA sequences from the RFAM database): https://x.com/MoAlQuraishi/status/2032471033760903511\n\nThese could further boost template-based modelling and deep learning-driven approaches!" } }