\n
![\"\"](\"https://www.googleapis.com/download/storage/v1/b/kaggle-forum-message-attachments/o/inbox%2F2149138%2F0ccaac09367d54d1a87d1a92d7b04e0e%2Fpreprocessing.png?generation=1600415091234100&alt=media\")
Have generated a 3-channel RGB dataset of size 512x512 using three different windows suggested by @vaillant here from the provided DICOM images.
\nI will try to upload the dataset if anyone needs it btw the size of the generated data is 507 GB. I am not sure Kaggle will allow to upload it.
", "messages": [ { "id": 1015468, "postDate": "2020-09-18T07:57:41.160Z", "content": "Have generated a 3-channel RGB dataset of size 512x512 using three different windows suggested by @vaillant here from the provided DICOM images.
\nI will try to upload the dataset if anyone needs it btw the size of the generated data is 507 GB. I am not sure Kaggle will allow to upload it.
", "rawMarkdown": "Have generated a 3-channel RGB dataset of size 512x512 using three different windows suggested by @vaillant [here](https://www.kaggle.com/c/rsna-str-pulmonary-embolism-detection/discussion/182930) from the provided DICOM images.\n\n- **RED** channel: **MEDIASTINAL** window [40,400]\n- **GREEN** channel: **PE** window [100,700]\n- **BLUE** channel: **LUNG** Window[-600,1500]\n\n\nI will try to upload the dataset if anyone needs it btw the size of the generated data is 507 GB. I am not sure Kaggle will allow to upload it.", "votes": 9 }, { "id": 1033574, "postDate": "2020-10-01T05:22:53.420Z", "content": "Why you all use these three window [40,400], [100,700] and [-600,1500] ?
\nHow about other window?
Window value is taken from this RSNA paper https://pubs.rsna.org/doi/pdf/10.1148/rg.245045008
", "rawMarkdown": "Window value is taken from this RSNA paper https://pubs.rsna.org/doi/pdf/10.1148/rg.245045008", "votes": 1 }, { "id": 1043650, "postDate": "2020-10-09T06:02:12.957Z", "content": "Thank you!
", "rawMarkdown": "Thank you!" } ] }, { "id": 1048567, "postDate": "2020-10-13T15:50:07.053Z", "content": "did you try uploading the dataset :) and is it helping in lb score ?
", "rawMarkdown": "did you try uploading the dataset :) and is it helping in lb score ? ", "replies": [ { "id": 1049119, "postDate": "2020-10-14T06:16:20.313Z", "content": "I didn't try to upload it as its size is above 500 GB. Here are image generated by a similar approach link1 link2
", "rawMarkdown": "I didn't try to upload it as its size is above 500 GB. Here are image generated by a similar approach [link1](https://www.kaggle.com/c/rsna-str-pulmonary-embolism-detection/discussion/185742) [link2](https://www.kaggle.com/c/rsna-str-pulmonary-embolism-detection/discussion/182930)" } ] }, { "id": 1016707, "postDate": "2020-09-19T07:13:52.173Z", "content": "thanks @sudhiriitb , can you share how to run parallelism on top of Ian's DICOM img code?🙏🙏
", "rawMarkdown": "thanks @sudhiriitb , can you share how to run parallelism on top of Ian's DICOM img code?🙏🙏\n", "replies": [ { "id": 1017812, "postDate": "2020-09-19T09:27:12.903Z", "content": "@fiyeroleung I have added parallelism to his code.
\nHere is the link to his new code
Thanks so much! @sudhiriitb
\nI made a stupid mistake no wonder it doesn't work.
\nYour code works like a champ and save me many hours!
Why you all use these three window [40,400], [100,700] and [-600,1500] ?
\nHow about other window?
Window value is taken from this RSNA paper https://pubs.rsna.org/doi/pdf/10.1148/rg.245045008
", "votes": 1, "replies": [] }, { "id": 1043650, "author_name": "HoneJie Li", "author_url": "", "post_date": "2020-10-09T06:02:12.957000", "content": "Thank you!
", "votes": 0, "replies": [] } ] }, { "id": 1048567, "author_name": "Shubham Thapa", "author_url": "", "post_date": "2020-10-13T15:50:07.053000", "content": "did you try uploading the dataset :) and is it helping in lb score ?
", "votes": 0, "replies": [ { "id": 1049119, "author_name": "SumanSudhir", "author_url": "", "post_date": "2020-10-14T06:16:20.313000", "content": "I didn't try to upload it as its size is above 500 GB. Here are image generated by a similar approach link1 link2
", "votes": 0, "replies": [] } ] }, { "id": 1016707, "author_name": "Salaryman", "author_url": "", "post_date": "2020-09-19T07:13:52.173000", "content": "thanks @sudhiriitb , can you share how to run parallelism on top of Ian's DICOM img code?🙏🙏
", "votes": 0, "replies": [ { "id": 1017812, "author_name": "SumanSudhir", "author_url": "", "post_date": "2020-09-19T09:27:12.903000", "content": "@fiyeroleung I have added parallelism to his code.
\nHere is the link to his new code
Thanks so much! @sudhiriitb
\nI made a stupid mistake no wonder it doesn't work.
\nYour code works like a champ and save me many hours!